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IDSCO2578 TypeCDS
From5881579 nt length1779
To5883357 aa length592
Gene pI4.41
Definitionputative membrane protein M.W (Da)62256
NoteSCC123.16c AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5479 putative membrane protein5257.0e-150
sgrSGR_4969 putative membrane protein4862.0e-138
samSAM23877_2628 Membrane protein8060.0e+00
scabSCAB60291 putative membrane protein6141.0e-176

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LytR_C1LytR cell envelope-related transcriptional attenuator501-58843.44.6e-11

LytR_cpsA_psr1Cell envelope-related transcriptional attenuator domain311-42026.84.4e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_106518375.1 polydiglycosylphosphate transferase PdtA [Streptomyces sp. 1... 21870.0e+00
WP_003976225.1 MULTISPECIES: polydiglycosylphosphate transferase PdtA [Stre... 21830.0e+00
WP_093456138.1 polydiglycosylphosphate transferase PdtA [Streptomyces sp. 2... 21780.0e+00
WP_191849437.1 polydiglycosylphosphate transferase PdtA [Streptomyces antho... 21720.0e+00
WP_030869990.1 polydiglycosylphosphate transferase PdtA [Streptomyces viola... 21680.0e+00
WP_121711636.1 polydiglycosylphosphate transferase PdtA [Streptomyces sp. E... 21600.0e+00
WP_109032954.1 polydiglycosylphosphate transferase PdtA [Streptomyces rubro... 21370.0e+00
MYS72825.1 LytR family transcriptional regulator [Streptomyces sp. SID5926] 21370.0e+00
NEC31617.1 LytR family transcriptional regulator [Streptomyces rubrogriseus] 21300.0e+00
WP_087809382.1 LCP family protein [Streptomyces sp. CS113] >gb 20880.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear