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IDSCO2617 TypeCDS
From5823424 nt length1287
To5824710 aa length428
GeneclpX pI4.78
DefinitionclpX ATP dependent Clp Protease ATP binding subunit M.W (Da)46749
NoteSCC80.02c AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5449 putative ATP-dependent Clp Protease ATP binding subunit7910.0e+00
sgrSGR_4925 putative ATP-dependent Clp Protease ATP binding subunit8000.0e+00
samSAM23877_2666 ATP-dependent Clp protease ATP-binding subunit8580.0e+00
scabSCAB59961 hypothetical protein8360.0e+00
saceSACE_1362 putative Clp protease ATP-binding subunit6400.0e+00
nfarnfa13350 putative Clp protease ATP-binding subunit6640.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AAA_21AAA domain (Cdc48 subfamily)115-312174.02.6e-51

zf-C4_ClpX1ClpX C4-type zinc finger11-4874.24.8e-21

AAA1ATPase family associated with various cellular activities (AAA)118-24561.11.3e-16

ClpB_D2-small1C-terminal, D2-small domain, of ClpB protein318-39554.67.7e-15

AAA_51AAA domain (dynein-related subfamily)117-19431.21.7e-07

RuvB_N1Holliday junction DNA helicase ruvB N-terminus60-19724.71.1e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011028457.1 ATP-dependent Clp protease ATP-binding subunit ClpX [Strepto... 21940.0e+00
WP_133885721.1 ATP-dependent Clp protease ATP-binding subunit ClpX [Strepto... 21910.0e+00
WP_061444769.1 MULTISPECIES: ATP-dependent Clp protease ATP-binding subunit... 21890.0e+00
WP_003976182.1 MULTISPECIES: ATP-dependent Clp protease ATP-binding subunit... 21880.0e+00
WP_031038410.1 ATP-dependent Clp protease ATP-binding subunit ClpX [Strepto... 21860.0e+00
WP_030399934.1 MULTISPECIES: ATP-dependent Clp protease ATP-binding subunit... 21850.0e+00
WP_077800183.1 ATP-dependent Clp protease ATP-binding subunit ClpX [Strepto... 21840.0e+00
WP_007449827.1 MULTISPECIES: ATP-dependent Clp protease ATP-binding subunit... 21820.0e+00
WP_076974314.1 MULTISPECIES: ATP-dependent Clp protease ATP-binding subunit... 21820.0e+00
WP_053130824.1 ATP-dependent Clp protease ATP-binding subunit ClpX [Strepto... 21810.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear