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IDSCO2626 TypeCDS
From5813503 nt length843
To5814345 aa length280
Gene pI8.18
Definitionputative DNA repair hydrolase (fragment) M.W (Da)30341
NoteSCC80.11c AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5427 putative endonuclease VIII and DNA N-glycosylase with an AP lyase activity4462.0e-126
sgrSGR_4916 putative DNA repair hydrolase4122.0e-116
samSAM23877_2676 Endonuclease 8 14682.0e-169
scabSCAB59861 putative endonuclease VIII and DNA N-glycosylase with an AP lyase activity4283.0e-121
saceSACE_1351 formamidopyrimidine-DNA glycosylase3171.0e-87
nfarnfa13280 putative formamidopyrimidine-DNA glycosylase2731.0e-74

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

H2TH1Formamidopyrimidine-DNA glycosylase H2TH domain133-21680.94.5e-23

zf-FPG_IleRS1Zinc finger found in FPG and IleRS252-28036.03.9e-09

Fapy_DNA_glyco1Formamidopyrimidine-DNA glycosylase N-terminal domain1-11332.78.8e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003976173.1 MULTISPECIES: Fpg/Nei family DNA glycosylase [Streptomyces] ... 10954.3e-149
WP_011028462.1 Fpg/Nei family DNA glycosylase [Streptomyces coelicolor] >gb... 10954.5e-149
WP_030869911.1 MULTISPECIES: Fpg/Nei family DNA glycosylase [Streptomyces] ... 10842.2e-147
WP_202493088.1 MULTISPECIES: Fpg/Nei family DNA glycosylase [Streptomyces] 10423.1e-141
WP_115742119.1 Fpg/Nei family DNA glycosylase [Streptomyces sp. CB09001] >g... 10294.3e-139
WP_109032922.1 Fpg/Nei family DNA glycosylase [Streptomyces rubrogriseus] >... 10242.4e-138
MYS74581.1 Fpg/Nei family DNA glycosylase [Streptomyces sp. SID5926] 10209.6e-138
WP_061444752.1 Fpg/Nei family DNA glycosylase [Streptomyces sp. CCM_MD2014]... 10145.4e-137
WP_226027962.1 Fpg/Nei family DNA glycosylase [Streptomyces hyderabadensis] 9852.3e-132
WP_104633596.1 Fpg/Nei family DNA glycosylase [Streptomyces sp. MH60] >gb 9808.6e-132

PSORT result

LocalizationCertaintyPSORT said
Not Clear