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IDSCO2656 TypeCDS
From5780649 nt length1227
To5779423 aa length408
Gene pI5.96
Definitionputative membrane protein M.W (Da)42383
NoteSC8E4A.26 AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5385 putative membrane protein4847.0e-138
sgrSGR_4875 putative membrane protein4886.0e-139
samSAM23877_2706 putative membrane protein6070.0e+00
scabSCAB59521 putative membrane protein5071.0e-144
saceSACE_1332 MscS mechanosensitive ion channel2232.0e-59
nfarnfa44870 putative transporter1372.0e-33

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MS_channel1Mechanosensitive ion channel161-360122.12e-35

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU42184.1 mechanosensitive ion channel [Streptomyces sp. SID7813] >gb 14490.0e+00
14310.0e+00
AXL88678.1 mechanosensitive ion channel protein MscS [Streptomyces sp. CB090... 14030.0e+00
MYS77916.1 mechanosensitive ion channel [Streptomyces sp. SID5926] 14010.0e+00
OWA03636.1 mechanosensitive ion channel protein MscS [Streptomyces sp. CS113... 14010.0e+00
AZM80277.1 mechanosensitive ion channel [Streptomyces sp. KPB2] 13980.0e+00
MYS52524.1 mechanosensitive ion channel [Streptomyces sp. SID6013] 13970.0e+00
QFX83901.1 mechanosensitive ion channel [Streptomyces sp. SYP-A7193] 13890.0e+00
MZG15026.1 mechanosensitive ion channel [Streptomyces sp. SID5914] 13880.0e+00
WP_161270043.1 mechanosensitive ion channel [Streptomyces coelicolor] >gb 13760.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear