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IDSCO2712 TypeCDS
From5711961 nt length720
To5711242 aa length239
Gene pI9.65
Definitionputative membrane protein M.W (Da)24307
NoteSCC61A.33 AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5353 hypothetical protein1494.0e-37
sgrSGR_524 conserved hypothetical protein1302.0e-31
samSAM23877_2742 putative membrane protein2362.0e-79
scabSCAB59091 putative membrane protein1941.0e-50

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_030866255.1 MULTISPECIES: LPS biosynthesis protein [Streptomyces] >gb 6219.7e-79
AIJ15743.1 hypothetical protein SLIV_24110 [Streptomyces lividans TK24] >gb 6212.8e-78
WP_164271465.1 lipopolysaccharide biosynthesis protein, partial [Streptomyc... 6125.2e-78
WP_174855136.1 lipopolysaccharide biosynthesis protein [Streptomyces rubrog... 6103.9e-77
MYS78585.1 lipopolysaccharide biosynthesis protein [Streptomyces sp. SID5926... 6088.5e-77
WP_210975407.1 lipopolysaccharide biosynthesis protein [Streptomyces sp. RM... 6033.9e-76
WP_193777462.1 lipopolysaccharide biosynthesis protein [Streptomyces sp. E5... 6033.9e-76
WP_171987211.1 lipopolysaccharide biosynthesis protein [Streptomyces sp. M1... 6034.0e-76
WP_059300612.1 hypothetical protein [Streptomyces canus] 6034.1e-76
WP_162833558.1 lipopolysaccharide biosynthesis protein [Streptomyces sp. CB... 6028.0e-76

PSORT result

LocalizationCertaintyPSORT said
Not Clear