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IDSCO2749 TypeCDS
From5671597 nt length390
To5671208 aa length129
Gene pI5.16
Definitioncarbohydrate transport protein M.W (Da)13365
NoteSCC57A.20 AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5316 putative D-ribose ABC transporter permease protein1951.0e-51
sgrSGR_1093 putative D-ribose ABC transporter auxiliary component2042.0e-54
samSAM23877_2774 D-ribose pyranase2161.0e-74

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RbsD_FucU1RbsD / FucU transport protein family1-127132.98.4e-39

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011028559.1 MULTISPECIES: D-ribose pyranase [Streptomyces] >sp 6382.2e-84
WP_003976051.1 MULTISPECIES: D-ribose pyranase [Streptomyces] >gb 6355.3e-84
WP_104632119.1 D-ribose pyranase [Streptomyces sp. MH60] >gb 6303.9e-83
WP_109032819.1 D-ribose pyranase [Streptomyces rubrogriseus] >gb 6261.3e-82
WP_059300488.1 D-ribose pyranase [Streptomyces canus] 6261.4e-82
WP_115742221.1 D-ribose pyranase [Streptomyces sp. CB09001] >gb 6251.8e-82
WP_087809234.1 D-ribose pyranase [Streptomyces sp. CS113] >gb 6225.0e-82
WP_121701395.1 MULTISPECIES: D-ribose pyranase [unclassified Streptomyces] ... 6226.0e-82
WP_030179767.1 D-ribose pyranase [Streptomyces violaceorubidus] 6191.5e-81
WP_133885628.1 D-ribose pyranase [Streptomyces sp. BK208] >lcl 6164.5e-81

PSORT result

LocalizationCertaintyPSORT said
Not Clear