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IDSCO2782 TypeCDS
From5631867 nt length1443
To5630425 aa length480
GenedesA pI5.12
Definitionlysine decarboxylase M.W (Da)52321
NoteSCC105.13 AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5272 lysine decarboxylase8430.0e+00
sgrSGR_4750 putative pyridoxal-dependent decarboxylase8060.0e+00
samSAM23877_2817 putative L-Lysine decarboxylase9280.0e+00
scabSCAB57951 putative lysine decarboxylase8480.0e+00
saceSACE_2888 aromatic-L-amino-acid decarboxylase1797.0e-46

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Pyridoxal_deC1Pyridoxal-dependent decarboxylase conserved domain62-401201.41.6e-59

SepSecS1O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS172-31329.62.6e-07

Aminotran_51Aminotransferase class-V142-26427.51.3e-06

Beta_elim_lyase1Beta-eliminating lyase140-33522.74.6e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_106517217.1 lysine decarboxylase DesA [Streptomyces sp. 111WW2] >gb 24370.0e+00
WP_011028583.1 MULTISPECIES: lysine decarboxylase DesA [Streptomyces] >gb 24350.0e+00
WP_136207791.1 lysine decarboxylase DesA [Streptomyces sp. LRa12] >lcl 24350.0e+00
WP_003976018.1 MULTISPECIES: lysine decarboxylase DesA [Streptomyces] >gb 24330.0e+00
WP_193484931.1 lysine decarboxylase DesA [Streptomyces anthocyanicus] >dbj 24320.0e+00
WP_093456206.1 MULTISPECIES: lysine decarboxylase DesA [unclassified Strept... 24320.0e+00
WP_191849564.1 lysine decarboxylase DesA [Streptomyces anthocyanicus] >dbj 24290.0e+00
WP_189283038.1 lysine decarboxylase DesA [Streptomyces anthocyanicus] >dbj 24270.0e+00
WP_210983679.1 aspartate aminotransferase family protein [Streptomyces sp. ... 24260.0e+00
WP_030866502.1 lysine decarboxylase DesA [Streptomyces violaceoruber] 24240.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear