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IDSCO2792 TypeCDS
From5620373 nt length1197
To5619177 aa length398
GeneadpA pI8.9
DefinitionadpA araC-family transcriptional regulator M.W (Da)42767
NoteSCC105.23 AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5261 putative AraC-family transcriptional regulator5922.0e-170
sgrSGR_4742 transcriptional regulator6270.0e+00
samSAM23877_2828 AdpA7060.0e+00
scabSCAB57831 putative AraC-family transcriptional regulator6670.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain254-33270.11.2e-19

HTH_AraC2Bacterial regulatory helix-turn-helix proteins, AraC family243-281, 294-33156.22.2e-15

DJ-1_PfpI1DJ-1/PfpI family27-19256.42.8e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011028588.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 18920.0e+00
WP_038534819.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 18880.0e+00
WP_109032787.1 helix-turn-helix domain-containing protein [Streptomyces rub... 18660.0e+00
WP_087809195.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 18620.0e+00
WP_061444585.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 18570.0e+00
WP_186777981.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 18510.0e+00
WP_115742256.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 18360.0e+00
WP_030179895.1 helix-turn-helix domain-containing protein [Streptomyces vio... 18350.0e+00
WP_133885590.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 18280.0e+00
WP_102929448.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 18240.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear