-- | --

IDSCO2829 TypeCDS
From5578834 nt length702
To5578133 aa length233
Gene pI10.41
Definitionprobable amino acid ABC transporter protein integral membrane component. M.W (Da)25473
NoteSCE20.03 AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5229 putative polar amino acid ABC transporter substrate-binding protein2753.0e-75
sgrSGR_4712 putative amino acid ABC transporter permease protein1471.0e-36
samSAM23877_2876 putative amino-acid ABC transporter permease protein y4tF4196.0e-152
scabSCAB57451 putative polar amino acid ABC transporter substrate-binding protein3053.0e-84
saceSACE_6268 putative amino acid ABC transporter permease1515.0e-38

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component37-21052.25.5e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003975971.1 MULTISPECIES: ectoine/hydroxyectoine ABC transporter permeas... 11756.9e-163
WP_109032751.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuC... 11722.2e-162
WP_121714717.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuC... 11695.8e-162
WP_159327756.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuC... 11634.9e-161
WP_104632190.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuC... 11626.0e-161
WP_087809158.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuC... 11559.6e-160
WP_161379004.1 MULTISPECIES: ectoine/hydroxyectoine ABC transporter permeas... 11541.0e-159
WP_226024703.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuC... 11513.0e-159
WP_030179988.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuC... 11513.3e-159
WP_115742309.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuC... 11504.8e-159

PSORT result

LocalizationCertaintyPSORT said
Not Clear