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IDSCO2846 TypeCDS
From5561275 nt length1221
To5562495 aa length406
Gene pI7.01
Definitionputative transcriptional regulatory protein M.W (Da)40087
NoteSCE20.20c AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5212 putative ROK-family transcriptional regulator4123.0e-116
sgrSGR_4689 putative ROK-family transcriptional regulator3824.0e-107
samSAM23877_2898 putative transcriptional regulatory protein5730.0e+00
scabSCAB57221 putative ROK-family transcriptional regulator4862.0e-138

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ROK1ROK family176-30793.81.2e-26

HTH_241Winged helix-turn-helix DNA-binding42-7323.33.1e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003975954.1 MULTISPECIES: ROK family transcriptional regulator [Streptom... 12258.4e-165
WP_193484918.1 ROK family transcriptional regulator [Streptomyces anthocyan... 12241.2e-164
WP_121714699.1 ROK family transcriptional regulator [Streptomyces sp. E5N91... 12152.8e-163
WP_202493135.1 MULTISPECIES: ROK family transcriptional regulator [Streptom... 12081.3e-162
WP_115742319.1 ROK family transcriptional regulator [Streptomyces sp. CB090... 11537.6e-154
KPC85215.1 hypothetical protein ADL35_13250 [Streptomyces sp. NRRL WC-3753] 11283.3e-150
WP_165687365.1 ROK family transcriptional regulator [Streptomyces sp. KO788... 11273.9e-150
WP_164386486.1 ROK family transcriptional regulator [Streptomyces sp. OM571... 11257.1e-150
WP_153181955.1 ROK family transcriptional regulator [Streptomyces sp. SYP-A... 11212.6e-149
WP_164458570.1 ROK family transcriptional regulator [Streptomyces tendae] >... 11223.8e-149

PSORT result

LocalizationCertaintyPSORT said
Not Clear