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IDSCO2928 TypeCDS
From5487617 nt length492
To5487126 aa length163
Gene pI6.8
Definitionputative asnC-family transcriptional regulator M.W (Da)17307
NoteSCE19A.28 AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5148 putative AsnC-family transcriptional regulator2568.0e-70
sgrSGR_4611 putative AsnC-family transcriptional regulator2761.0e-75
samSAM23877_2966 Transcription regulator AsnC3013.0e-107
scabSCAB56361 putative AsnC-family transcriptional regulator2822.0e-77
saceSACE_0906 AsnC-family transcriptional regulator1422.0e-35

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AsnC_trans_reg1Lrp/AsnC ligand binding domain75-14151.66.2e-14

HTH_241Winged helix-turn-helix DNA-binding7-5338.36.4e-10

HTH_AsnC-type1AsnC-type helix-turn-helix domain6-4736.04.1e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
EFD68970.1 transcription regulator AsnC [Streptomyces lividans TK24] 8162.7e-110
WP_011028667.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 8152.9e-110
EOY47985.1 Transcriptional regulator, AsnC family [Streptomyces lividans 132... 8172.9e-110
WP_093456251.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 8111.1e-109
WP_115746406.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 8101.7e-109
MZG14214.1 winged helix-turn-helix transcriptional regulator [Streptomyces s... 8074.1e-109
NDZ70233.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. SID10... 8078.0e-109
WP_102930146.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 8059.0e-109
WP_179235632.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 8051.1e-108
WP_121711499.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 8041.2e-108

PSORT result

LocalizationCertaintyPSORT said
Not Clear