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IDSCO2933 TypeCDS
From5482956 nt length969
To5481988 aa length322
Gene pI4.95
Definitionputative permease binding-protein component M.W (Da)34536
NoteSCE19A.33 AseI frg.E
SignalP v.4.0Signal peptide | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5144 putative ABC transporter substrate-binding protein5039.0e-144
sgrSGR_4607 putative ABC transporter solute-binding protein4222.0e-119
samSAM23877_2970 Permease binding-protein component5460.0e+00
saceSACE_0080 possible glycine betaine/carnitine/choline binding protein precursor2719.0e-74
nfarnfa32500 putative transporter permease2501.0e-67

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

OpuAC1Substrate binding domain of ABC-type glycine betaine transport system47-315205.49.8e-61

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011028669.1 MULTISPECIES: glycine betaine ABC transporter substrate-bind... 15900.0e+00
WP_003975877.1 MULTISPECIES: glycine betaine ABC transporter substrate-bind... 15860.0e+00
WP_030865455.1 MULTISPECIES: glycine betaine ABC transporter substrate-bind... 15810.0e+00
WP_121711506.1 glycine betaine ABC transporter substrate-binding protein [S... 15720.0e+00
NEV86565.1 glycine betaine ABC transporter substrate-binding protein [Strept... 15690.0e+00
MZG14218.1 glycine/betaine ABC transporter substrate-binding protein [Strept... 15670.0e+00
MYS76719.1 glycine/betaine ABC transporter substrate-binding protein [Strept... 15660.0e+00
WP_109032669.1 glycine betaine ABC transporter substrate-binding protein [S... 15630.0e+00
WP_210915014.1 MULTISPECIES: glycine betaine ABC transporter substrate-bind... 15620.0e+00
WP_153179625.1 glycine betaine ABC transporter substrate-binding protein [S... 15620.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear