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IDSCO2950 TypeCDS
From5460824 nt length282
To5461105 aa length93
Genehup pI10.15
Definitionhup DNA binding protein Hu (hs1) M.W (Da)9851
NoteSCE59.09c AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5127 putative DNA-binding protein Hu 11435.0e-36
sgrSGR_4582 putative DNA-binding protein Hu 11556.0e-40
samSAM23877_2987 DNA-binding protein HU 11842.0e-63
scabSCAB55941 putative DNA-binding protein Hu 11834.0e-48

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Bac_DNA_binding1Bacterial DNA-binding protein1-9097.43.7e-28

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003950507.1 MULTISPECIES: HU family DNA-binding protein [Streptomyces] >... 4714.0e-60
WP_055606937.1 MULTISPECIES: HU family DNA-binding protein [Streptomyces] >... 4706.6e-60
WP_004987462.1 MULTISPECIES: HU family DNA-binding protein [Streptomyces] >... 4707.5e-60
WP_215121071.1 HU family DNA-binding protein [Streptomyces sp. MG62] >gb 4697.9e-60
WP_125506134.1 MULTISPECIES: HU family DNA-binding protein [unclassified St... 4681.3e-59
WP_004000874.1 MULTISPECIES: HU family DNA-binding protein [Streptomyces] >... 4681.4e-59
WP_003990598.1 MULTISPECIES: HU family DNA-binding protein [Actinomycetia] ... 4681.4e-59
WP_108955122.1 MULTISPECIES: HU family DNA-binding protein [Streptomyces] >... 4681.5e-59
WP_004930812.1 HU family DNA-binding protein [Streptomyces griseoflavus] >g... 4671.9e-59
WP_042173245.1 MULTISPECIES: HU family DNA-binding protein [Streptomyces] >... 4662.5e-59

PSORT result

LocalizationCertaintyPSORT said
Not Clear