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IDSCO2980 TypeCDS
From5421829 nt length918
To5420912 aa length305
Gene pI5.29
Definitionputative integral membrane transport protein M.W (Da)32802
NoteSCE50.08 AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5096 putative multiple sugar ABC transporter permease protein3953.0e-111
sgrSGR_4549 putative ABC transporter permease protein4446.0e-126
samSAM23877_3016 Alpha-glucoside transport system permease protein AglG5470.0e+00
scabSCAB55621 putative ABC transporter permease protein4347.0e-123

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component117-29052.73.8e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003975831.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 14480.0e+00
WP_121713620.1 carbohydrate ABC transporter permease [Streptomyces sp. E5N9... 14430.0e+00
MYS70100.1 ABC transporter permease subunit [Streptomyces sp. SID5926] 14260.0e+00
WP_109032631.1 carbohydrate ABC transporter permease [Streptomyces rubrogri... 14210.0e+00
WP_164278164.1 carbohydrate ABC transporter permease [Streptomyces rubrogri... 14180.0e+00
WP_115742409.1 carbohydrate ABC transporter permease [Streptomyces sp. CB09... 14120.0e+00
WP_159329902.1 carbohydrate ABC transporter permease [Streptomyces tendae] 14050.0e+00
WP_226024835.1 carbohydrate ABC transporter permease [Streptomyces hyderaba... 14020.0e+00
WP_164458009.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 14010.0e+00
WP_125631171.1 MULTISPECIES: carbohydrate ABC transporter permease [unclass... 14010.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear