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IDSCO3007 TypeCDS
From5386846 nt length1176
To5385671 aa length391
Gene pI8.86
Definitionhypothetical protein M.W (Da)43826
NoteSCE33.09 AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5069 hypothetical protein6320.0e+00
sgrSGR_4529 conserved hypothetical protein6290.0e+00
samSAM23877_3045 putative cytoplasmic protein7340.0e+00
scabSCAB55351 hypothetical protein6950.0e+00
saceSACE_5905 protein of unknown function DUF10062071.0e-54
nfarnfa38710 hypothetical protein1724.0e-44

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_421Winged helix DNA-binding domain40-362231.31.9e-68

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011028712.1 MULTISPECIES: winged helix DNA-binding domain-containing pro... 18760.0e+00
WP_193484835.1 winged helix DNA-binding domain-containing protein [Streptom... 18710.0e+00
WP_016326376.1 MULTISPECIES: winged helix DNA-binding domain-containing pro... 18710.0e+00
WP_210984868.1 winged helix DNA-binding domain-containing protein [Streptom... 18690.0e+00
WP_109032607.1 winged helix DNA-binding domain-containing protein [Streptom... 18670.0e+00
WP_121708848.1 winged helix DNA-binding domain-containing protein [Streptom... 18660.0e+00
WP_115742430.1 winged helix DNA-binding domain-containing protein [Streptom... 18370.0e+00
WP_224297540.1 winged helix DNA-binding domain-containing protein [Streptom... 18270.0e+00
WP_030191727.1 winged helix DNA-binding domain-containing protein [Streptom... 18260.0e+00
WP_195890763.1 winged helix DNA-binding domain-containing protein [Streptom... 18240.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear