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IDSCO3009 TypeCDS
From5383885 nt length765
To5384649 aa length254
Gene pI7.73
Definitionhypothetical protein M.W (Da)27893
NoteSCE33.11c AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5067 putative sigma 54 modulation protein/ribosomal protein S30EA4148.0e-117
sgrSGR_4527 conserved hypothetical protein3577.0e-100
samSAM23877_3047 Sigma 54 modulation protein/SSU ribosomal protein S30P4492.0e-163
scabSCAB55331 putative sigma 54 modulation protein/ribosomal protein S30EA4307.0e-122
saceSACE_6443 S30AE family protein1577.0e-40
nfarnfa46070 hypothetical protein1484.0e-37

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosom_S30AE_C1Sigma 54 modulation/S30EA ribosomal protein C terminus178-23178.12.7e-22

Ribosomal_S30AE1Sigma 54 modulation protein / S30EA ribosomal protein27-12470.51.4e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003975803.1 MULTISPECIES: ribosome-associated translation inhibitor RaiA... 13260.0e+00
WP_167307463.1 MULTISPECIES: ribosome-associated translation inhibitor RaiA... 12980.0e+00
WP_206210487.1 ribosome-associated translation inhibitor RaiA [Streptomyces... 12909.8e-180
WP_207629061.1 ribosome-associated translation inhibitor RaiA [Streptomyces... 12881.6e-179
WP_222514454.1 ribosome-associated translation inhibitor RaiA [Streptomyces... 12803.6e-178
WP_202545677.1 ribosome-associated translation inhibitor RaiA [Streptomyces... 12786.9e-178
WP_203613567.1 MULTISPECIES: ribosome-associated translation inhibitor RaiA... 12771.2e-177
WP_202436988.1 ribosome-associated translation inhibitor RaiA [Streptomyces... 12586.3e-175
WP_203715039.1 ribosome-associated translation inhibitor RaiA [Streptomyces... 12464.3e-173
WP_202557906.1 ribosome-associated translation inhibitor RaiA [Streptomyces... 12365.8e-171

PSORT result

LocalizationCertaintyPSORT said
Not Clear