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IDSCO3047 TypeCDS
From5329232 nt length1575
To5327658 aa length524
Gene pI10.36
Definitionputative membrane protein M.W (Da)56603
NoteSCBAC19G2.02 AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5030 putative transcriptional regulator6350.0e+00
sgrSGR_4490 putative transcriptional regulator6450.0e+00
samSAM23877_3091 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr8420.0e+00
scabSCAB54961 putative transcriptional regulator7020.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LytR_cpsA_psr1Cell envelope-related transcriptional attenuator domain147-300156.07.1e-46

LytR_C1LytR cell envelope-related transcriptional attenuator409-49556.34.4e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU42573.1 LytR family transcriptional regulator [Streptomyces sp. SID7813] ... 24130.0e+00
AIJ15423.1 transcriptional regulator [Streptomyces lividans TK24] >gb 24000.0e+00
GHA50224.1 LytR family transcriptional regulator [Streptomyces anthocyanicu... 23970.0e+00
WP_128146075.1 MULTISPECIES: LCP family protein [Streptomyces] >gb 22180.0e+00
WP_016326400.1 MULTISPECIES: LCP family protein [Streptomyces] >gb 22050.0e+00
WP_191849781.1 LCP family protein [Streptomyces anthocyanicus] 22020.0e+00
WP_193783650.1 LCP family protein [Streptomyces sp. E5N91] 21960.0e+00
MYS72533.1 LytR family transcriptional regulator [Streptomyces sp. SID5926] 21890.0e+00
WP_164275506.1 LCP family protein [Streptomyces rubrogriseus] >gb 21810.0e+00
WP_174855189.1 LCP family protein [Streptomyces rubrogriseus] 21730.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear