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IDSCO3048 TypeCDS
From5326433 nt length1194
To5327626 aa length397
Gene pI6.82
Definitionputative membrane protein M.W (Da)42428
NoteSCBAC19G2.03c AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5028 putative transcriptional regulator5753.0e-165
sgrSGR_4488 putative transcriptional regulator5223.0e-149
samSAM23877_3092 hypothetical protein6280.0e+00
scabSCAB54951 putative transcriptional regulator5246.0e-150
saceSACE_3765 probable transcriptional regulator, LytR family2211.0e-58
nfarnfa1290 putative transcriptional regulator2086.0e-55

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LytR_cpsA_psr1Cell envelope-related transcriptional attenuator domain153-308153.73.6e-45

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU42574.1 LytR family transcriptional regulator [Streptomyces sp. SID7813] ... 16470.0e+00
REH21414.1 LytR family transcriptional attenuator [Streptomyces sp. 2221.1] ... 16440.0e+00
EFD68846.1 transcriptional regulator [Streptomyces lividans TK24] >gb 16430.0e+00
WP_173943953.1 MULTISPECIES: LCP family protein [Streptomyces] >gb 16430.0e+00
WP_191849766.1 LCP family protein [Streptomyces anthocyanicus] 16420.0e+00
GHA50218.1 transcriptional regulator [Streptomyces anthocyanicus] 16420.0e+00
WP_173668734.1 MULTISPECIES: LCP family protein [unclassified Streptomyces] 16420.0e+00
WP_189284299.1 MULTISPECIES: LCP family protein [Streptomyces] >gb 16400.0e+00
GGL57833.1 transcriptional regulator [Streptomyces anthocyanicus] >dbj 16390.0e+00
AXL89019.1 transcriptional regulator [Streptomyces sp. CB09001] 15980.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear