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IDSCO3090 TypeCDS
From5285178 nt length2532
To5282647 aa length843
Gene pI5.26
Definitionputative ABC transporter integral membrane protein M.W (Da)87563
NoteSCE25.31 AseI frg.E
SignalP v.4.0Signal peptide | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3527 putative ABC transporter permease protein6920.0e+00
sgrSGR_4445 putative ABC transporter permease protein11910.0e+00
samSAM23877_3139 ABC transporter integral membrane protein15620.0e+00
scabSCAB76961 putative ABC transporter permease protein9260.0e+00
saceSACE_3193 ABC-type antimicrobial peptide transporter, permease component1944.0e-50
nfarnfa46540 putative ABC transporter permease3802.0e-106

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

FtsX2FtsX-like permease family269-389, 719-835142.36e-42

MacB_PCD2MacB-like periplasmic core domain17-232, 491-67781.58.9e-23

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003975721.1 MULTISPECIES: FtsX-like permease family protein [Streptomyce... 37950.0e+00
WP_210984782.1 ABC transporter permease [Streptomyces sp. RK76] >lcl 37940.0e+00
WP_093456307.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 37920.0e+00
WP_106518141.1 FtsX-like permease family protein [Streptomyces sp. 111WW2] ... 37920.0e+00
WP_191849748.1 ABC transporter permease [Streptomyces anthocyanicus] >dbj 37890.0e+00
WP_121715986.1 FtsX-like permease family protein [Streptomyces sp. E5N91] 37720.0e+00
GGL58211.1 ABC transporter [Streptomyces anthocyanicus] 37680.0e+00
WP_164272670.1 ABC transporter permease [Streptomyces rubrogriseus] >gb 37240.0e+00
WP_109034627.1 ABC transporter permease [Streptomyces rubrogriseus] 37230.0e+00
MYS73764.1 FtsX-like permease family protein [Streptomyces sp. SID5926] 37170.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear