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IDSCO3097 TypeCDS
From5274691 nt length735
To5275425 aa length244
Gene pI8.98
Definitionputative secreted protein M.W (Da)24877
NoteSCE41.06c AseI frg.E
SignalP v.4.0Signal peptide | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3534 putative secreted protein2384.0e-64
sgrSGR_4438 putative secreted protein2876.0e-79
samSAM23877_3147 Secreted protein3348.0e-118
scabSCAB54431 putative secreted protein2892.0e-79
nfarnfa6370 hypothetical protein1192.0e-28

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Transglycosylas1Transglycosylase-like domain41-117122.76.3e-36

LysM1LysM domain197-24336.53.5e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011028764.1 MULTISPECIES: resuscitation-promoting factor protein RpfA [S... 7654.4e-100
WP_030870448.1 MULTISPECIES: resuscitation-promoting factor protein RpfA [S... 7621.5e-99
WP_003975714.1 MULTISPECIES: resuscitation-promoting factor protein RpfA [S... 7611.7e-99
WP_109034635.1 resuscitation-promoting factor protein RpfA [Streptomyces ru... 7611.8e-99
MYS76920.1 resuscitation-promoting factor protein RpfA [Streptomyces sp. SID... 7585.9e-99
WP_087808949.1 resuscitation-promoting factor protein RpfA [Streptomyces sp... 7577.3e-99
WP_030189910.1 transglycosylase family protein [Streptomyces violaceorubidu... 7561.1e-98
WP_007450474.1 MULTISPECIES: resuscitation-promoting factor protein RpfA [S... 7551.6e-98
WP_087790661.1 MULTISPECIES: resuscitation-promoting factor protein RpfA [S... 7541.7e-98
WP_164384442.1 resuscitation-promoting factor protein RpfA [Streptomyces sp... 7541.7e-98

PSORT result

LocalizationCertaintyPSORT said
Not Clear