| ID | SCO3109 | Type | CDS |
| From | 5259195 | nt length | 3555 |
| To | 5262749 | aa length | 1184 |
| Gene | pI | 5.04 | |
| Definition | putative transcriptional-repair coupling factor | M.W (Da) | 129497 |
| Note | SCE41.18c | AseI frg. | E |
| SignalP v.4.0 | Non-secretory protein | plot | Category |
| Bacteria* | Reciprocally best hit to | Score | E-value |
| avm | SAVERM_3549 putative transcriptional-repair coupling factor | 2067 | 0.0e+00 |
| sgr | SGR_4422 putative transcriptional-repair coupling factor | 2090 | 0.0e+00 |
| sam | SAM23877_3158 Transcription-repair-coupling factor | 2239 | 0.0e+00 |
| scab | SCAB54321 putative transcriptional-repair coupling factor | 2144 | 0.0e+00 |
| sace | SACE_0826 transcription-repair coupling factor | 1331 | 0.0e+00 |
| nfar | nfa48750 putative transcription-repair coupling factor | 1247 | 0.0e+00 |
| Model | No. | Description | Position (aa) | Score | E-value | |
| CarD_CdnL_TRCF | 1 | CarD-like/TRCF domain | 507-606 | 108.9 | 1.4e-31 | |
| TRCF | 1 | TRCF domain | 1040-1122 | 84.4 | 5.1e-24 | |
| DEAD | 1 | DEAD/DEAH box helicase | 656-798 | 62.4 | 3.9e-17 | |
| Helicase_C | 1 | Helicase conserved C-terminal domain | 841-940 | 59.0 | 4.9e-16 | |
| ResIII | 1 | Type III restriction enzyme, res subunit | 637-792 | 25.3 | 1.1e-05 |
| ID | Description | Score | E-value |
| WP_011028772.1 | MULTISPECIES: transcription-repair coupling factor [Streptom... | 5468 | 0.0e+00 |
| WP_003975702.1 | MULTISPECIES: transcription-repair coupling factor [Streptom... | 5463 | 0.0e+00 |
| WP_189284313.1 | transcription-repair coupling factor [Streptomyces anthocyan... | 5460 | 0.0e+00 |
| WP_121709562.1 | transcription-repair coupling factor [Streptomyces sp. E5N91... | 5447 | 0.0e+00 |
| WP_115742518.1 | transcription-repair coupling factor [Streptomyces sp. CB090... | 5376 | 0.0e+00 |
| WP_133890601.1 | transcription-repair coupling factor [Streptomyces sp. BK208... | 5373 | 0.0e+00 |
| WP_061444311.1 | transcription-repair coupling factor [Streptomyces sp. CCM_M... | 5354 | 0.0e+00 |
| WP_125631001.1 | MULTISPECIES: transcription-repair coupling factor [unclassi... | 5353 | 0.0e+00 |
| WP_176155026.1 | transcription-repair coupling factor [Streptomyces sp. NA031... | 5352 | 0.0e+00 |
| WP_164419643.1 | MULTISPECIES: transcription-repair coupling factor [Streptom... | 5350 | 0.0e+00 |
| Localization | Certainty | PSORT said |
| Not Clear |