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IDSCO3147 TypeCDS
From5218519 nt length1815
To5220333 aa length604
Gene pI5.19
Definitionputative ABC transporter ATP-binding subunit M.W (Da)66960
NoteSCE66.26c AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3584 putative ABC transporter ATP-binding protein9710.0e+00
sgrSGR_4362 putative ABC transporter ATP-binding protein10220.0e+00
samSAM23877_3194 ABC transporter ATP-binding subunit11030.0e+00
scabSCAB53891 putative ABC transporter ATP-binding protein10640.0e+00
saceSACE_0808 putative ABC transporter ATP-binding subunit6310.0e+00
nfarnfa49000 putative ABC transporter ATP-binding protein5855.0e-168

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran2ABC transporter21-159, 306-447157.72.1e-46

ABC_tran_CTD1ABC transporter C-terminal domain541-60234.51.7e-08

ABC_tran_Xtn1ABC transporter198-25630.23.2e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003975669.1 MULTISPECIES: ABC-F family ATP-binding cassette domain-conta... 28330.0e+00
WP_121709370.1 ABC-F family ATP-binding cassette domain-containing protein ... 28280.0e+00
WP_016326438.1 ABC-F family ATP-binding cassette domain-containing protein ... 28250.0e+00
WP_030870513.1 ABC-F family ATP-binding cassette domain-containing protein ... 28230.0e+00
WP_030192010.1 ABC-F family ATP-binding cassette domain-containing protein ... 28160.0e+00
WP_165289074.1 ABC-F family ATP-binding cassette domain-containing protein ... 28150.0e+00
WP_153179452.1 ABC-F family ATP-binding cassette domain-containing protein ... 28130.0e+00
WP_109034717.1 ABC-F family ATP-binding cassette domain-containing protein ... 28120.0e+00
MYS70986.1 ATP-binding cassette domain-containing protein [Streptomyces sp. ... 28090.0e+00
WP_115742550.1 ABC-F family ATP-binding cassette domain-containing protein ... 28090.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear