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IDSCO3159 TypeCDS
From5206145 nt length1062
To5205084 aa length353
Gene pI8.7
Definitionputative membrane protein M.W (Da)35785
NoteSCE87.10 AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3606 putative cobalt ABC transporter permease protein4718.0e-134
sgrSGR_4321 putative membrane protein4853.0e-138
samSAM23877_3205 putative membrane protein5630.0e+00
scabSCAB53361 putative cobalt ABC transporter permease protein4962.0e-141
saceSACE_3840 cobalamin (vitamin B12) biosynthesis CbiM protein1702.0e-43

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CbiM1Cobalt uptake substrate-specific transmembrane region2-208203.53e-60

PDGLE1PDGLE domain257-33355.53.6e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011028801.1 MULTISPECIES: energy-coupling factor ABC transporter permeas... 12754.4e-174
WP_093456338.1 MULTISPECIES: energy-coupling factor ABC transporter permeas... 12754.4e-174
WP_191849727.1 energy-coupling factor ABC transporter permease [Streptomyce... 12721.2e-173
WP_003975657.1 MULTISPECIES: energy-coupling factor ABC transporter permeas... 12711.5e-173
WP_121716713.1 energy-coupling factor ABC transporter permease [Streptomyce... 12711.8e-173
EOY48226.1 Substrate-specific component NikM of nickel ECF transporter [Stre... 12636.7e-172
WP_159327056.1 energy-coupling factor ABC transporter permease [Streptomyce... 12349.2e-168
WP_189746166.1 energy-coupling factor ABC transporter permease [Streptomyce... 12312.0e-167
MYS70412.1 cobalt ABC transporter permease [Streptomyces sp. SID5926] 12302.4e-167
WP_164460033.1 MULTISPECIES: PDGLE domain-containing protein [unclassified ... 12302.7e-167

PSORT result

LocalizationCertaintyPSORT said
Not Clear