ID	SCO3202	Type	CDS
From	5156129	nt length	999
To	5157127	aa length	332
Gene	hrdD	pI	4.91
Definition	RNA polymerase principal sigma factor	M.W (Da)	37155
Note	SCE22.19c	AseI frg.	E
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r3	1	Sigma-70 region 3	179-255	91.3	2.8e-26
	Sigma70_r2	1	Sigma-70 region 2	100-170	73.5	8e-21
	Sigma70_r4	1	Sigma-70, region 4	269-321	60.2	9.3e-17
	Sigma70_r1_2	1	Sigma-70 factor, region 1.2	34-67	44.4	1.1e-11

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_003975615.1	MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S...	1561	0.0e+00
WP_164250304.1	sigma-70 family RNA polymerase sigma factor [Streptomyces co...	1561	0.0e+00
WP_007388798.1	MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S...	1557	0.0e+00
WP_053132639.1	sigma-70 family RNA polymerase sigma factor [Streptomyces am...	1557	0.0e+00
WP_106518440.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp...	1555	0.0e+00
WP_031044499.1	MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S...	1555	0.0e+00
WP_052839251.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp...	1554	0.0e+00
WP_030190975.1	MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S...	1554	0.0e+00
CAA37174.1	unnamed protein product [Streptomyces coelicolor A3(2)]	1554	0.0e+00
WP_164384364.1	MULTISPECIES: sigma-70 family RNA polymerase sigma factor [u...	1553	0.0e+00

PSORT result

Localization	Certainty	PSORT said
Not Clear

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