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IDSCO3209 TypeCDS
From5149875 nt length1575
To5148301 aa length524
Gene pI9.66
Definitionputative transcriptional regulator M.W (Da)55353
NoteSCE8.02 AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3701 putative IclR-family transcriptional regulator5602.0e-160
samSAM23877_3258 putative transcriptional regulator7540.0e+00
scabSCAB52831 putative IclR-family transcriptional regulator6123.0e-176
saceSACE_3509 transcriptional regulator, IclR family1682.0e-42
nfarnfa35250 putative transcriptional regulator1511.0e-37

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

IclR2Bacterial transcriptional regulator132-264, 442-509107.05.3e-31

HTH_IclR2IclR helix-turn-helix domain18-69, 301-34871.14.5e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011028828.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 19440.0e+00
5W1EA PobR in complex with PHB [Streptomyces coelicolor A3(2)] 19430.0e+00
WP_030872397.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 19370.0e+00
WP_189284333.1 helix-turn-helix domain-containing protein [Streptomyces ant... 19330.0e+00
WP_191849711.1 helix-turn-helix domain-containing protein [Streptomyces ant... 19320.0e+00
WP_210985211.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 19320.0e+00
WP_121708807.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 19250.0e+00
MYS69837.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 18830.0e+00
WP_109034822.1 helix-turn-helix domain-containing protein [Streptomyces rub... 18800.0e+00
WP_164272745.1 helix-turn-helix domain-containing protein [Streptomyces rub... 18780.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear