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IDSCO3272 TypeCDS
From5049528 nt length369
To5049896 aa length122
Gene pI7.46
Definitionputative DNA binding protein M.W (Da)13777
NoteSCE39.22c AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
samSAM23877_3275 DNA-binding helix-turn-helix protein1034.0e-31

*sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_31Helix-turn-helix74-10128.41.1e-06

HTH_311Helix-turn-helix domain67-10427.92e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
EFD68645.1 DNA-binding protein [Streptomyces lividans TK24] >gb 6321.2e-83
AIJ15223.1 DNA-binding protein [Streptomyces lividans TK24] >gb 4623.3e-58
WP_164378061.1 XRE family transcriptional regulator [Streptomyces sp. SID80... 3366.5e-39
WP_193453950.1 type II toxin-antitoxin system RelE/ParE family toxin [Strep... 3411.8e-38
EFL01046.1 DNA-binding protein [Streptomyces sp. SPB78] 3333.8e-38
WP_164272028.1 helix-turn-helix domain-containing protein [Streptomyces rub... 3244.8e-37
WP_223001118.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 3244.9e-37
WP_155055737.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 3245.0e-37
WP_030383235.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 3245.8e-37
WP_224221506.1 helix-turn-helix domain-containing protein [Streptomyces oli... 3237.2e-37

PSORT result

LocalizationCertaintyPSORT said
Not Clear