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IDSCO3308 TypeCDS
From5006473 nt length1395
To5007867 aa length464
Gene pI5.03
Definitionputative membrane protein M.W (Da)47576
NoteSCE68.06c AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4744 putative DNA-binding protein2857.0e-78
samSAM23877_4247 putative DNA-binding protein1705.0e-48

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain5-6852.44.7e-14

HTH_261Cro/C1-type HTH DNA-binding domain10-6823.84.2e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011028900.1 transcriptional regulator [Streptomyces coelicolor] >gb 15740.0e+00
WP_191849677.1 transcriptional regulator [Streptomyces anthocyanicus] >dbj 15710.0e+00
WP_202492479.1 MULTISPECIES: transcriptional regulator [Streptomyces] 15700.0e+00
WP_030871347.1 transcriptional regulator [Streptomyces violaceoruber] 11908.1e-158
WP_189285508.1 MULTISPECIES: transcriptional regulator [Streptomyces] >lcl 11908.1e-158
WP_003975527.1 MULTISPECIES: transcriptional regulator [Streptomyces] >gb 11908.9e-158
WP_121712439.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11021.2e-144
EOY48366.1 DNA-binding protein [Streptomyces lividans 1326] 10533.0e-140
WP_115742685.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 10281.9e-133
WP_202559220.1 transcriptional regulator [Streptomyces sp. SID5914] 9791.3e-125

PSORT result

LocalizationCertaintyPSORT said
Not Clear