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IDSCO3338 TypeCDS
From4971585 nt length801
To4972385 aa length266
Gene pI8.07
Definitionputative integral membrane protein M.W (Da)28200
NoteSCE7.05c AseI frg.E
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4723 putative ABC transporter permease protein3662.0e-102
sgrSGR_4140 putative ABC transporter permease protein3653.0e-102
samSAM23877_4222 putative integral membrane protein4154.0e-149
scabSCAB39231 putative ABC transporter permease protein3953.0e-111
nfarnfa19880 putative transporter1954.0e-51

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC2_membrane1ABC-2 type transporter31-227121.52.8e-35

ABC2_membrane_31ABC-2 family transporter protein69-25877.01.3e-21

ABC2_membrane_21ABC-2 family transporter protein76-26342.15.6e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_046247946.1 ABC transporter permease, partial [Streptomyces sp. WM6391] ... 9507.0e-128
WP_016326517.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 9529.8e-128
WP_115742709.1 ABC transporter permease [Streptomyces sp. CB09001] >gb 9511.4e-127
WP_011028918.1 MULTISPECIES: ABC transporter permease [Streptomyces] >lcl 9501.8e-127
WP_159327316.1 ABC transporter permease [Streptomyces tendae] 9502.0e-127
MYS69860.1 ABC transporter permease [Streptomyces sp. SID5926] 9472.1e-127
WP_164459116.1 ABC transporter permease [Streptomyces tendae] >gb 9492.3e-127
WP_127895238.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 9492.3e-127
WP_189739344.1 ABC transporter permease [Streptomyces tendae] >dbj 9492.5e-127
WP_125629481.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 9475.0e-127

PSORT result

LocalizationCertaintyPSORT said
Not Clear