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IDSCO3351 TypeCDS
From4956820 nt length1410
To4955411 aa length469
Gene pI7.61
Definitionputative DNA repair protein M.W (Da)49839
NoteSCE94.02 AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4710 putative DNA repair protein7800.0e+00
sgrSGR_4129 putative DNA repair protein8090.0e+00
samSAM23877_4210 DNA repair protein RadA-like protein8450.0e+00
scabSCAB39361 putative DNA repair protein8190.0e+00
saceSACE_0436 DNA repair protein4762.0e-135
nfarnfa4320 putative DNA repair protein4361.0e-123

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ATPase1KaiC74-13958.84.3e-16

AAA_251AAA domain78-22252.15.2e-14

ChlI1Subunit ChlI of Mg-chelatase370-42935.47.2e-09

Lon_C1Lon protease (S16) C-terminal proteolytic domain364-43029.16.1e-07

DnaB_C1DnaB-like helicase C terminal domain74-13726.53.2e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003975483.1 MULTISPECIES: DNA repair protein RadA [Streptomyces] >gb 21090.0e+00
WP_011028928.1 MULTISPECIES: DNA repair protein RadA [Streptomyces] >gb 21090.0e+00
WP_159327304.1 MULTISPECIES: DNA repair protein RadA [Streptomyces] >lcl 21080.0e+00
WP_054100914.1 MULTISPECIES: DNA repair protein RadA [Streptomyces] >gb 21060.0e+00
WP_109029476.1 DNA repair protein RadA [Streptomyces rubrogriseus] >gb 21040.0e+00
WP_061443262.1 MULTISPECIES: DNA repair protein RadA [Streptomyces] >gb 21040.0e+00
WP_030184215.1 MULTISPECIES: DNA repair protein RadA [Streptomyces] 21040.0e+00
WP_226030111.1 DNA repair protein RadA [Streptomyces hyderabadensis] 21030.0e+00
WP_087807959.1 DNA repair protein RadA [Streptomyces sp. CS113] >gb 21020.0e+00
WP_031050312.1 DNA repair protein RadA [Streptomyces sp. NRRL F-5650] 21020.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear