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IDSCO3361 TypeCDS
From4946931 nt length453
To4947383 aa length150
Gene pI6.8
Definitionputative AsnC-family transcriptional regulator M.W (Da)16870
NoteSCE94.12c AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3764 putative AsnC-family transcriptional regulator1921.0e-50
samSAM23877_3313 AsnC-family transcriptional regulatory protein2235.0e-77
saceSACE_5264 AsnC-family transcriptional regulator1252.0e-30
nfarnfa44740 putative transcriptional regulator1021.0e-23

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AsnC_trans_reg1Lrp/AsnC ligand binding domain69-13971.63.5e-20

HTH_241Winged helix-turn-helix DNA-binding1-4865.81.7e-18

HTH_AsnC-type1AsnC-type helix-turn-helix domain1-4261.06.2e-17

HTH_201Helix-turn-helix domain3-4933.53e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003975474.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 7602.4e-102
WP_164250269.1 Lrp/AsnC family transcriptional regulator [Streptomyces coel... 7455.3e-100
WP_104632011.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 7411.9e-99
WP_121710344.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 7386.1e-99
WP_127895377.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 7377.4e-99
WP_102930767.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 7361.3e-98
WP_161378017.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 7342.4e-98
WP_030404787.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [unc... 7324.8e-98
WP_226030124.1 Lrp/AsnC family transcriptional regulator [Streptomyces hyde... 7281.8e-97
WP_061443270.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 7264.4e-97

PSORT result

LocalizationCertaintyPSORT said
Not Clear