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IDSCO3413 TypeCDS
From4887833 nt length762
To4888594 aa length253
GenetipA pI4.75
Definitiontranscriptional regulator M.W (Da)28679
NoteSCE9.20 AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4657 putative MerR-family transcriptional regulator3292.0e-91
sgrSGR_2034 putative MerR-family transcriptional regulator2063.0e-54
samSAM23877_4150 HTH-type transcriptional activator TipA4919.0e-180
scabSCAB39861 putative MerR-family transcriptional regulator3607.0e-101
saceSACE_7241 MerR-family transcriptional regulator2785.0e-76
nfarnfa29380 putative transcriptional regulator1454.0e-36

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TipAS1TipAS antibiotic-recognition domain131-246134.13e-39

MerR_11MerR HTH family regulatory protein3-7061.17.3e-17

MerR1MerR family regulatory protein4-4151.17.2e-14

MerR-DNA-bind1MerR, DNA binding46-10041.21.6e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003975420.1 MULTISPECIES: MerR family transcriptional regulator [Strepto... 12127.2e-168
WP_193485150.1 MerR family transcriptional regulator [Streptomyces anthocya... 12074.0e-167
WP_202492484.1 MULTISPECIES: MerR family transcriptional regulator [Strepto... 12094.1e-167
WP_121714035.1 MerR family transcriptional regulator [Streptomyces sp. E5N9... 12022.4e-166
WP_087790043.1 MerR family transcriptional regulator [Streptomyces sp. CS15... 11866.4e-164
WP_115742763.1 MerR family transcriptional regulator [Streptomyces sp. CB09... 11868.7e-164
WP_102928992.1 MerR family transcriptional regulator [Streptomyces diastati... 11832.4e-163
WP_007452041.1 MerR family transcriptional regulator [Streptomyces coelicof... 11832.5e-163
WP_165285327.1 MerR family transcriptional regulator [Streptomyces sp. V17-... 11813.9e-163
WP_109029436.1 MerR family transcriptional regulator [Streptomyces rubrogri... 11814.7e-163

PSORT result

LocalizationCertaintyPSORT said
Not Clear