-- | --

IDSCO3417 TypeCDS
From4883823 nt length783
To4884605 aa length260
Gene pI9.86
Definitionputative ABC transporter transmembrane component M.W (Da)27575
NoteSCE9.24c AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4654 putative ABC transporter permease protein3622.0e-101
sgrSGR_4076 putative ABC transporter permease protein3232.0e-89
samSAM23877_4148 putative ABC transporter transmembrane component4712.0e-171
scabSCAB39891 putative ABC transporter permease protein4201.0e-118
nfarnfa21440 putative ABC transporter membrane protein2022.0e-53

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC2_membrane1ABC-2 type transporter17-22292.71.8e-26

ABC2_membrane_31ABC-2 family transporter protein60-25051.01.1e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AIJ15080.1 ABC transporter [Streptomyces lividans TK24] >gb 8892.0e-118
GGL72599.1 transport permease protein [Streptomyces anthocyanicus] 8892.4e-118
PSK52259.1 Daunorubicin/doxorubicin resistance ABC transporter permease prot... 8859.2e-118
GHA72022.1 transport permease protein [Streptomyces anthocyanicus] 8831.8e-117
AXL89345.1 multidrug ABC transporter permease [Streptomyces sp. CB09001] 8641.4e-114
WP_189284881.1 ABC transporter permease [Streptomyces anthocyanicus] 8465.0e-112
WP_162833579.1 ABC transporter permease [Streptomyces sp. CB09001] 8465.4e-112
WP_003975416.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 8457.1e-112
WP_198653089.1 ABC transporter permease [Streptomyces sp. 111WW2] 8412.7e-111
QUW92769.1 Daunorubicin/doxorubicin resistance ABC transporter permease prot... 8432.7e-111

PSORT result

LocalizationCertaintyPSORT said
Not Clear