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IDSCO3537 TypeCDS
From4761467 nt length1173
To4762639 aa length390
Gene pI9.12
Definitionputative DNA-binding protein M.W (Da)42782
NoteSCE2.18c AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
scabSCAB23891 putative DNA-binding protein1058.0e-24

*scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF9551Domain of unknown function (DUF955)173-29165.73.2e-18

HTH_311Helix-turn-helix domain19-7349.53.7e-13

HTH_31Helix-turn-helix24-7347.21.6e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU43059.1 ImmA/IrrE family metallo-endopeptidase [Streptomyces sp. SID7813]... 18670.0e+00
WP_161270107.1 MULTISPECIES: XRE family transcriptional regulator [Streptom... 18660.0e+00
WP_200717930.1 MULTISPECIES: XRE family transcriptional regulator [unclassi... 18370.0e+00
WP_103501466.1 MULTISPECIES: XRE family transcriptional regulator [unclassi... 18340.0e+00
WP_211042586.1 XRE family transcriptional regulator [Streptomyces tardus] >... 18330.0e+00
WP_221477068.1 ImmA/IrrE family metallo-endopeptidase [Streptomyces zagrose... 16610.0e+00
WP_106981004.1 XRE family transcriptional regulator [Streptomyces fulvoviol... 15070.0e+00
KUN57214.1 DNA-binding protein [Streptomyces canus] 14100.0e+00
WP_149037916.1 XRE family transcriptional regulator [Kitasatospora sp. MBT6... 14090.0e+00
11448.5e-155

PSORT result

LocalizationCertaintyPSORT said
Not Clear