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IDSCO3543 TypeCDS
From4749623 nt length2859
To4752481 aa length952
Gene pI9.27
Definitionprobable DNA topoisomerase I M.W (Da)103567
NoteSCH5.06c AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4621 putative DNA topoisomerase I15210.0e+00
sgrSGR_3301 putative DNA topoisomerase I16400.0e+00
samSAM23877_4123 DNA topoisomerase 116710.0e+00
scabSCAB40781 putative DNA topoisomerase I16380.0e+00
saceSACE_0377 DNA topoisomerase I10130.0e+00
nfarnfa3670 putative DNA topoisomerase I10100.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Topoisom_bac1DNA topoisomerase149-591439.89.3e-132

Toprim_C_rpt4Topoisomerase C-terminal repeat642-693, 701-764, 771-821, 834-886205.07.6e-62

Toprim1Toprim domain14-13498.81.6e-28

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029075.1 MULTISPECIES: type I DNA topoisomerase [Streptomyces] >sp 42560.0e+00
WP_003975392.1 MULTISPECIES: type I DNA topoisomerase [Streptomyces] >gb 42550.0e+00
WP_193485157.1 type I DNA topoisomerase [Streptomyces anthocyanicus] >dbj 42540.0e+00
WP_030867797.1 type I DNA topoisomerase [Streptomyces violaceoruber] 42460.0e+00
WP_121713895.1 type I DNA topoisomerase [Streptomyces sp. E5N91] 42430.0e+00
WP_164274787.1 type I DNA topoisomerase [Streptomyces rubrogriseus] >gb 42380.0e+00
WP_109029413.1 type I DNA topoisomerase [Streptomyces rubrogriseus] 42370.0e+00
WP_159327243.1 type I DNA topoisomerase [Streptomyces tendae] 42350.0e+00
WP_189739553.1 type I DNA topoisomerase [Streptomyces tendae] >dbj 42300.0e+00
WP_127893660.1 MULTISPECIES: type I DNA topoisomerase [Streptomyces] >lcl 42260.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear