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IDSCO3626 TypeCDS
From4661664 nt length885
To4662548 aa length294
Gene pI4.78
Definitionputative RNA polymerase sigma factor M.W (Da)31559
NoteSCH10.04c AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
samSAM23877_3990 putative RNA polymerase sigma factor4462.0e-160

*sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 216-7547.11.4e-12

Sigma70_r4_21Sigma-70, region 4116-16231.41e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU43149.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp. SID... 11696.0e-160
PSK51168.1 putative ECF RNA polymerase sigma factor SigI [Streptomyces sp. 1... 11558.8e-158
NEC36447.1 sigma-70 family RNA polymerase sigma factor [Streptomyces rubrogr... 11496.7e-157
AIJ14979.1 RNA polymerase sigma factor [Streptomyces lividans TK24] >gb 11497.8e-157
WP_173943915.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... 11331.7e-154
WP_191849105.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... 11201.6e-152
WP_030867886.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... 11141.0e-151
WP_174854993.1 sigma-70 family RNA polymerase sigma factor [Streptomyces ru... 11131.6e-151
OWA08202.1 RNA polymerase subunit sigma-70 [Streptomyces sp. CS113] 11053.1e-150
MZG14925.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp. SID... 10898.5e-148

PSORT result

LocalizationCertaintyPSORT said
Not Clear