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IDSCO3832 TypeCDS
From4452774 nt length408
To4452367 aa length135
Gene pI9.98
Definitionputative transcriptional regulator M.W (Da)14942
NoteSCH69.02 AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4361 putative AsnC-family transcriptional regulator2338.0e-63
sgrSGR_3747 putative AsnC-family transcriptional regulator2182.0e-58
samSAM23877_3825 Transcriptional regulator2652.0e-93
scabSCAB45321 putative AsnC-family transcriptional regulator2443.0e-66
saceSACE_3951 transcriptional regulator, AsnC family1267.0e-31

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AsnC_trans_reg1Lrp/AsnC ligand binding domain63-12845.64.6e-12

HTH_241Winged helix-turn-helix DNA-binding2-3839.03.8e-10

HTH_AsnC-type1AsnC-type helix-turn-helix domain2-3133.03.5e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
CAB45199.1 putative transcriptional regulator [Streptomyces coelicolor A3(2... 6166.6e-81
AIJ14771.1 transcriptional regulator [Streptomyces lividans TK24] >gb 6208.0e-81
WP_003975102.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 6181.2e-80
WP_109029198.1 Lrp/AsnC family transcriptional regulator [Streptomyces rubr... 6171.9e-80
WP_115743018.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 6152.8e-80
WP_043371376.1 Lrp/AsnC family transcriptional regulator [Streptomyces muta... 6153.3e-80
GGQ47455.1 transcriptional regulator [Streptomyces mutabilis] 6154.3e-80
WP_191889113.1 Lrp/AsnC family transcriptional regulator [Streptomyces muta... 6144.7e-80
GGQ62403.1 transcriptional regulator [Streptomyces flaveolus] 6145.4e-80
WP_189230348.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 6136.5e-80

PSORT result

LocalizationCertaintyPSORT said
Not Clear