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IDSCO3834 TypeCDS
From4450191 nt length1515
To4451705 aa length504
Gene pI4.86
Definitionputative ABC-transporter ATP-binding component M.W (Da)53285
NoteSCH69.04c AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4359 putative 3-hydroxyacyl-CoA dehydrogenase7240.0e+00
sgrSGR_1384 putative 3-hydroxyacyl-CoA dehydrogenase2542.0e-68
samSAM23877_3823 3-hydroxyadipyl-CoA dehydrogenase7760.0e+00
scabSCAB45341 putative 3-hydroxyacyl-CoA dehydrogenase7650.0e+00
saceSACE_4006 3-hydroxybutyryl-CoA dehydrogenase2881.0e-78

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

3HCDH_N13-hydroxyacyl-CoA dehydrogenase, NAD binding domain10-187189.73.8e-56

3HCDH23-hydroxyacyl-CoA dehydrogenase, C-terminal domain190-287, 413-495155.53.9e-46

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029259.1 MULTISPECIES: 3-hydroxyacyl-CoA dehydrogenase [Streptomyces]... 24890.0e+00
WP_003975100.1 MULTISPECIES: 3-hydroxyacyl-CoA dehydrogenase [Streptomyces]... 24880.0e+00
WP_193485242.1 3-hydroxyacyl-CoA dehydrogenase [Streptomyces anthocyanicus]... 24840.0e+00
WP_189283196.1 3-hydroxyacyl-CoA dehydrogenase [Streptomyces anthocyanicus]... 24820.0e+00
WP_093456517.1 MULTISPECIES: 3-hydroxyacyl-CoA dehydrogenase [unclassified ... 24810.0e+00
WP_121710057.1 3-hydroxyacyl-CoA dehydrogenase [Streptomyces sp. E5N91] 24720.0e+00
WP_104636412.1 3-hydroxyacyl-CoA dehydrogenase [Streptomyces sp. MH60] >gb 23130.0e+00
WP_109029196.1 3-hydroxyacyl-CoA dehydrogenase [Streptomyces rubrogriseus] 23060.0e+00
MYS77948.1 3-hydroxyacyl-CoA dehydrogenase [Streptomyces sp. SID5926] 22990.0e+00
WP_164278467.1 3-hydroxyacyl-CoA dehydrogenase [Streptomyces rubrogriseus] ... 22960.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear