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IDSCO3869 TypeCDS
From4414651 nt length5031
To4409621 aa length1676
Gene pI5.12
Definitionputative WD-40 repeat protein M.W (Da)177236
NoteSCH18.06 AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_3398 putative WD-repeat containing protein4021.0e-112
samSAM23877_3788 WD-40 repeat-containing protein16860.0e+00
scabSCAB16491 putative WD-repeat containing protein5799.0e-166
saceSACE_2545 WD-40 repeat protein3608.0e-100

*sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

WD4012WD domain, G-beta repeat1020-1052, 1062-1098, 1112-1144, 1154-1189, 1203-1235, 1249-1281, 1304-1327, 1340-1360, 1432-1454, 1466-1500, 1515-1546, 1559-1592316.71.5e-97

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU43392.1 hypothetical protein [Streptomyces sp. SID7813] >emb 71600.0e+00
WP_154878029.1 hypothetical protein [Streptomyces coelicolor] >gb 71520.0e+00
TYP167... 71400.0e+00
WP_038534635.1 MULTISPECIES: WD-40 repeat protein [Streptomyces] >gb 70990.0e+00
AIJ14735.1 WD-40 repeat-containing protein [Streptomyces lividans TK24] >gb 70800.0e+00
70580.0e+00
WP_202493383.1 MULTISPECIES: hypothetical protein [Streptomyces] 70580.0e+00
REH22128.1 WD-40 repeat-containing protein [Streptomyces sp. 2221.1] >emb 70540.0e+00
GHC02148.1 hypothetical protein GCM10010348_23850 [Streptomyces anthocyanic... 70450.0e+00
WP_189283208.1 hypothetical protein [Streptomyces anthocyanicus] 70260.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear