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IDSCO3876 TypeCDS
From4399945 nt length1122
To4401066 aa length373
GenerecF pI7.05
DefinitionrecF DNA replication protein M.W (Da)40743
NoteSCH18.13c AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4319 putative DNA recombination and repair protein6340.0e+00
sgrSGR_3703 putative DNA recombination and repair protein6460.0e+00
samSAM23877_3782 DNA replication and repair protein RecF7220.0e+00
scabSCAB45791 putative DNA recombination and repair protein6830.0e+00
saceSACE_0005 DNA replication and repair protein4177.0e-118
nfarnfa30 putative recombination and repair protein3716.0e-104

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SMC_N1RecF/RecN/SMC N terminal domain3-34867.41.1e-18

AAA_231AAA domain6-8738.51.5e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003975056.1 MULTISPECIES: DNA replication/repair protein RecF [Streptomy... 18220.0e+00
WP_030863449.1 DNA replication/repair protein RecF [Streptomyces violaceoru... 18190.0e+00
WP_193485262.1 DNA replication/repair protein RecF [Streptomyces anthocyani... 18160.0e+00
WP_016326693.1 DNA replication/repair protein RecF [Streptomyces lividans] ... 18160.0e+00
WP_104633804.1 DNA replication/repair protein RecF [Streptomyces sp. MH60] ... 18160.0e+00
WP_121714296.1 DNA replication/repair protein RecF [Streptomyces sp. E5N91] 18130.0e+00
WP_093456527.1 MULTISPECIES: DNA replication/repair protein RecF [unclassif... 18130.0e+00
WP_216720027.1 DNA replication/repair protein RecF [Streptomyces sp. A108] ... 18110.0e+00
WP_210975173.1 DNA replication/repair protein RecF [Streptomyces sp. RM72] ... 18090.0e+00
WP_031036532.1 MULTISPECIES: DNA replication/repair protein RecF [Streptomy... 18060.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear