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IDSCO3900 TypeCDS
From4371958 nt length678
To4372635 aa length225
Gene pI6.81
Definitionhypothetical protein M.W (Da)25185
NoteSCH24.22c AseI frg.H
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4295 putative PadR-like family transcriptional regulator3453.0e-96
sgrSGR_3680 putative PadR-like family transcriptional regulator3684.0e-103
samSAM23877_3756 hypothetical protein4445.0e-162
scabSCAB46021 putative PadR-like family transcriptional regulator3846.0e-108
saceSACE_7358 transcriptional regulator, PadR-like family1461.0e-36
nfarnfa55530 putative transcriptional regulator1371.0e-33

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

PadR1Transcriptional regulator PadR-like family12-9257.87.3e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003975031.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 10582.3e-145
MYS78513.1 PadR family transcriptional regulator [Streptomyces sp. SID5926] 10522.2e-144
WP_109029147.1 helix-turn-helix transcriptional regulator [Streptomyces rub... 10496.6e-144
WP_053133901.1 PadR family transcriptional regulator [Streptomyces ambofaci... 10462.2e-143
WP_019324689.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 10443.7e-143
WP_115743107.1 PadR family transcriptional regulator [Streptomyces sp. CB09... 10435.0e-143
WP_007388937.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 10435.7e-143
WP_191887041.1 helix-turn-helix transcriptional regulator [Streptomyces mut... 10426.5e-143
WP_100049572.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 10419.3e-143
WP_125630073.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 10411.2e-142

PSORT result

LocalizationCertaintyPSORT said
Not Clear