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IDSCO3914 TypeCDS
From4356658 nt length465
To4357122 aa length154
Gene pI5.2
Definitionputative transcriptional regulator M.W (Da)16699
NoteSCH24.36c AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4281 putative MarR-family transcriptional regulator2406.0e-65
sgrSGR_3665 putative MarR-family transcriptional regulator2583.0e-70
samSAM23877_3741 Transcriptional regulator%2C MarR family2852.0e-101
scabSCAB46191 putative MarR-family transcriptional regulator2583.0e-70
saceSACE_1908 transcriptional regulator, MarR family1662.0e-42
nfarnfa21140 putative transcriptional regulator1251.0e-30

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MarR1MarR family59-10139.34.1e-10

MarR_21MarR family37-10137.91.1e-09

HTH_271Winged helix DNA-binding domain51-11025.81e-05

HTH_IclR1IclR helix-turn-helix domain45-9223.63.1e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003975018.1 MULTISPECIES: MarR family transcriptional regulator [Strepto... 7058.7e-94
WP_109029138.1 MarR family transcriptional regulator [Streptomyces rubrogri... 6981.0e-92
WP_121713324.1 MarR family transcriptional regulator [Streptomyces sp. E5N9... 6971.3e-92
WP_115743115.1 MarR family transcriptional regulator [Streptomyces sp. CB09... 6935.6e-92
WP_226024969.1 MarR family transcriptional regulator [Streptomyces hyderaba... 6892.0e-91
WP_030189050.1 MarR family transcriptional regulator [Streptomyces violaceo... 6892.4e-91
WP_133889985.1 MarR family transcriptional regulator [Streptomyces sp. BK20... 6882.9e-91
WP_030403092.1 MULTISPECIES: MarR family transcriptional regulator [Strepto... 6883.3e-91
WP_061443664.1 MarR family transcriptional regulator [Streptomyces sp. CCM_... 6865.7e-91
WP_122616533.1 MarR family transcriptional regulator [Streptomyces sp. Tu 4... 6867.4e-91

PSORT result

LocalizationCertaintyPSORT said
Not Clear