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IDSCO3919 TypeCDS
From4352214 nt length906
To4353119 aa length301
GeneabaB pI6.14
Definitionputative lysR-family transcriptional regulator M.W (Da)32118
NoteSCQ11.02c AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4274 putative LysR-family transcriptional regulator4601.0e-130
samSAM23877_3736 HTH-type transcriptional regulator AraB5160.0e+00
scabSCAB46241 putative LysR-family transcriptional regulator4908.0e-140
saceSACE_3468 LysR-family transcriptional regulator2201.0e-58

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain90-29787.19.2e-25

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family4-6176.21.3e-21

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029308.1 LysR family transcriptional regulator [Streptomyces coelicol... 14410.0e+00
14370.0e+00
WP_202493401.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 14360.0e+00
WP_030863508.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 14360.0e+00
PSK59095.1 HTH-type transcriptional activator AllS [Streptomyces sp. 111WW2]... 14320.0e+00
WP_189283220.1 LysR family transcriptional regulator [Streptomyces anthocya... 14310.0e+00
WP_136208066.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 14280.0e+00
WP_121713315.1 LysR family transcriptional regulator [Streptomyces sp. E5N9... 14240.0e+00
GHA33585.1 LysR family transcriptional regulator [Streptomyces anthocyanicu... 14230.0e+00
WP_003975013.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 14220.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear