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IDSCO3946 TypeCDS
From4325050 nt length1005
To4324046 aa length334
GenecydB pI6.68
Definitionputative cytochrome oxidase subunit II M.W (Da)37001
NoteSCD78.13 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4259 putative cytochrome bd-I oxidase subunit II4961.0e-141
sgrSGR_3645 putative cytochrome D ubiquinol oxidase subunit II5453.0e-156
samSAM23877_3718 Cytochrome bd ubiquinol oxidase subunit 25800.0e+00
scabSCAB46411 putative cytochrome bd-I oxidase subunit II cytochrome bd complex)5353.0e-153
saceSACE_0143 cytochrome d ubiquinol oxidase subunit II2685.0e-73
nfarnfa5860 putative cytochrome D ubiquinol oxidase subunit II2862.0e-78

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Cyt_bd_oxida_II1Cytochrome bd terminal oxidase subunit II3-320384.43.4e-115

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029331.1 MULTISPECIES: cytochrome d ubiquinol oxidase subunit II [Str... 13470.0e+00
WP_093456537.1 MULTISPECIES: cytochrome d ubiquinol oxidase subunit II [Str... 13400.0e+00
WP_164419026.1 cytochrome d ubiquinol oxidase subunit II [Streptomyces coel... 13370.0e+00
WP_003974997.1 MULTISPECIES: cytochrome d ubiquinol oxidase subunit II [Str... 13370.0e+00
WP_186777766.1 cytochrome d ubiquinol oxidase subunit II [Streptomyces sp. ... 13370.0e+00
WP_102932608.1 MULTISPECIES: cytochrome d ubiquinol oxidase subunit II [Str... 13330.0e+00
WP_164272147.1 cytochrome d ubiquinol oxidase subunit II [Streptomyces rubr... 13330.0e+00
MYS78392.1 cytochrome d ubiquinol oxidase subunit II [Streptomyces sp. SID59... 13300.0e+00
WP_121716842.1 cytochrome d ubiquinol oxidase subunit II [Streptomyces sp. ... 13300.0e+00
WP_134653510.1 cytochrome d ubiquinol oxidase subunit II [Streptomyces sp. ... 13300.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear