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IDSCO3947 TypeCDS
From4323970 nt length3519
To4320452 aa length1172
GenecydCD pI9.49
Definitionputative ABC transporter M.W (Da)122739
NoteSCD78.14 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4258 putative ABC transporter ATP-binding protein14510.0e+00
sgrSGR_3644 putative ABC transporter ATP-binding protein and permease component14690.0e+00
samSAM23877_3717 Transport ATP-binding protein CydCD17980.0e+00
scabSCAB46421 putative ABC transporter ATP-binding protein16320.0e+00
saceSACE_0144 putative ABC transporter ATP-binding protein4943.0e-140
nfarnfa5870 putative ABC transporter ATP-binding protein2843.0e-77

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran2ABC transporter351-499, 944-1091208.73.7e-62

ABC_membrane2ABC transporter transmembrane region22-280, 647-861126.41.5e-36

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_136208063.1 thiol reductant ABC exporter subunit CydD [Streptomyces sp. ... 29830.0e+00
WP_011029332.1 thiol reductant ABC exporter subunit CydD [Streptomyces coel... 29780.0e+00
WP_202493407.1 MULTISPECIES: thiol reductant ABC exporter subunit CydD [Str... 29740.0e+00
WP_191849092.1 thiol reductant ABC exporter subunit CydD [Streptomyces anth... 29710.0e+00
WP_003974996.1 MULTISPECIES: thiol reductant ABC exporter subunit CydD [Str... 29710.0e+00
WP_193485272.1 thiol reductant ABC exporter subunit CydD [Streptomyces anth... 29630.0e+00
WP_106517187.1 thiol reductant ABC exporter subunit CydD [Streptomyces sp. ... 29630.0e+00
WP_093456538.1 MULTISPECIES: thiol reductant ABC exporter subunit CydD [unc... 29610.0e+00
WP_189283224.1 thiol reductant ABC exporter subunit CydD [Streptomyces anth... 29590.0e+00
WP_121716844.1 thiol reductant ABC exporter subunit CydD [Streptomyces sp. ... 29550.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear