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IDSCO3948 TypeCDS
From4320347 nt length1683
To4318665 aa length560
Gene pI5.66
Definitionputative two component sensor M.W (Da)59243
NoteSCD78.15 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4257 putative two-component system sensor kinase7260.0e+00
sgrSGR_3643 putative two-component system sensor kinase7680.0e+00
samSAM23877_3716 Hypoxia sensor histidine kinase response regulator DosT9250.0e+00
saceSACE_0145 two-component system sensor kinase1381.0e-33

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GAF_22GAF domain39-178, 209-342141.42e-41

GAF2GAF domain39-178, 209-342109.21.8e-31

GAF_32GAF domain42-179, 209-34270.71.3e-19

HisKA_31Histidine kinase360-42343.43.2e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029333.1 MULTISPECIES: GAF domain-containing protein [Streptomyces] >... 26240.0e+00
WP_136208062.1 GAF domain-containing protein [Streptomyces sp. LRa12] >lcl 26160.0e+00
WP_003974995.1 MULTISPECIES: GAF domain-containing protein [Streptomyces] >... 26130.0e+00
WP_191849093.1 GAF domain-containing protein [Streptomyces anthocyanicus] >... 26120.0e+00
WP_164278700.1 GAF domain-containing protein [Streptomyces rubrogriseus] >g... 26060.0e+00
WP_210984724.1 GAF domain-containing protein [Streptomyces sp. RK76] >lcl 26030.0e+00
WP_093456539.1 MULTISPECIES: GAF domain-containing protein [unclassified St... 26030.0e+00
WP_121716846.1 GAF domain-containing protein [Streptomyces sp. E5N91] 26020.0e+00
WP_109029120.1 GAF domain-containing protein [Streptomyces rubrogriseus] 26000.0e+00
MYS71616.1 GAF domain-containing protein [Streptomyces sp. SID5926] 25980.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear