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IDSCO3957 TypeCDS
From4310539 nt length882
To4309658 aa length293
Gene pI10.3
Definitionpossible integral membrane protein M.W (Da)30699
NoteSCD78.24 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4249 putative ABC transporter permease protein4201.0e-118
sgrSGR_3635 putative ABC transporter permease protein4177.0e-118
samSAM23877_3708 putative integral membrane protein5200.0e+00
scabSCAB46511 putative ABC transporter permease protein4592.0e-130

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
CAA22229.1 possible integral membrane protein [Streptomyces coelicolor A3(2... 13430.0e+00
WP_003974986.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 13400.0e+00
WP_121716855.1 ABC transporter permease [Streptomyces sp. E5N91] 13360.0e+00
WP_164245532.1 ABC transporter permease [Streptomyces coelicoflavus] >gb 13360.0e+00
WP_109029112.1 hypothetical protein [Streptomyces rubrogriseus] >gb 13350.0e+00
MYS71624.1 ABC transporter permease [Streptomyces sp. SID5926] 13350.0e+00
WP_007388891.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 13250.0e+00
WP_134653505.1 MULTISPECIES: ABC transporter permease [Streptomyces] >lcl 13230.0e+00
WP_108987178.1 hypothetical protein [Streptomyces coelicoflavus] 13220.0e+00
WP_125630131.1 ABC transporter permease [Streptomyces sp. KPB2] >gb 13200.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear