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IDSCO3959 TypeCDS
From4308738 nt length720
To4308019 aa length239
Gene pI9.63
Definitionpossible integral membrane protein M.W (Da)24760
NoteSCD78.26 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4247 putative ABC transporter permease protein3116.0e-86
sgrSGR_3633 putative ABC transporter permease protein4038.0e-114
samSAM23877_3706 Integral membrane protein4183.0e-151
scabSCAB46531 putative ABC transporter permease protein3861.0e-108

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC2_membrane_21ABC-2 family transporter protein55-16841.49e-11

ABC2_membrane_41ABC-2 family transporter protein17-15230.33.4e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003974984.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 7202.0e-93
WP_093456542.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 7202.3e-93
WP_043382433.1 ABC transporter permease [Streptomyces mutabilis] >gb 7176.9e-93
WP_121716857.1 ABC transporter permease [Streptomyces sp. E5N91] 7167.6e-93
WP_226024944.1 ABC transporter permease [Streptomyces hyderabadensis] 7151.4e-92
WP_007388893.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 7141.8e-92
WP_115743147.1 ABC transporter permease [Streptomyces sp. CB09001] >gb 7132.3e-92
KPC69764.1 membrane protein [Streptomyces sp. NRRL WC-3753] 7133.0e-92
WP_133889953.1 ABC transporter permease [Streptomyces sp. BK208] >lcl 7123.2e-92
WP_064728754.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 7123.7e-92

PSORT result

LocalizationCertaintyPSORT said
Not Clear