-- | --

IDSCO3997 TypeCDS
From4276647 nt length1140
To4275508 aa length379
Gene pI10.6
Definitionputative integrase M.W (Da)41800
NoteSCBAC25E3.34 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3728 putative tyrosine-family recombinase/integrase1451.0e-35
sgrSGR_3613 putative integrase1103.0e-25
samSAM23877_3683 Putative integrase3063.0e-106
scabSCAB46981 putative tyrosine-family recombinase/integrase7060.0e+00
nfarnfa7110 putative phage integrase1355.0e-33

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Phage_integrase1Phage integrase family178-34861.38.9e-17

Phage_int_SAM_31Phage integrase, N-terminal SAM-like domain71-12435.48.7e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
CAC44721.1 putative integrase, partial [Streptomyces coelicolor A3(2)] 18940.0e+00
WP_134112193.1 MULTISPECIES: site-specific integrase [Streptomyces] >gb 18940.0e+00
WP_224295578.1 site-specific integrase [Streptomyces olivaceus] >lcl 18200.0e+00
WP_161329308.1 site-specific integrase [Streptomyces sp. SID5789] >gb 18170.0e+00
WP_164278062.1 site-specific integrase [Streptomyces rubrogriseus] >gb 18140.0e+00
KPC69726.1 integrase [Streptomyces sp. NRRL WC-3753] 18140.0e+00
WP_121701045.1 site-specific integrase [Streptomyces sp. E5N298] 18140.0e+00
WP_189283264.1 site-specific integrase [Streptomyces anthocyanicus] >dbj 18120.0e+00
WP_031048533.1 site-specific integrase [Streptomyces sp. NRRL F-5650] 18000.0e+00
WP_197925126.1 site-specific integrase [Streptomyces sp. HB-N217] >lcl 17910.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear