ID	SCO4034	Type	CDS
From	4235868	nt length	957
To	4236824	aa length	318
Gene		pI	4.33
Definition	putative RNA polymerase sigma factor	M.W (Da)	34484
Note	2SC10A7.38c	AseI frg.	D
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4	1	Sigma-70, region 4	264-313	70.6	5.3e-20
	Sigma70_r2	1	Sigma-70 region 2	97-166	63.8	8.2e-18
	Sigma70_r3	1	Sigma-70 region 3	178-236	45.3	6.1e-12
	Sigma70_r4_2	1	Sigma-70, region 4	264-311	37.1	1.7e-09

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_003974928.1	MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces...	1467	0.0e+00
WP_059303045.1	MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces...	1454	0.0e+00
WP_159329650.1	RNA polymerase sigma factor SigF [Streptomyces tendae]	1451	0.0e+00
WP_076975326.1	MULTISPECIES: RNA polymerase sigma factor SigF [unclassified...	1450	0.0e+00
WP_121702259.1	RNA polymerase sigma factor SigF [Streptomyces sp. E5N298]	1445	0.0e+00
WP_104635003.1	RNA polymerase sigma factor SigF [Streptomyces sp. MH60] >gb...	1445	0.0e+00
WP_127893967.1	MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces...	1443	0.0e+00
WP_161379318.1	RNA polymerase sigma factor SigF [Streptomyces sp. SID5914] ...	1438	0.0e+00
WP_186777800.1	RNA polymerase sigma factor SigF [Streptomyces sp. SS06011]	1419	0.0e+00
WP_030403187.1	MULTISPECIES: RNA polymerase sigma factor SigF [unclassified...	1417	0.0e+00

PSORT result

Localization	Certainty	PSORT said
Not Clear

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