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IDSCO4092 TypeCDS
From4176886 nt length3984
To4180869 aa length1327
GenehrpA pI8.26
DefinitionATP-dependent helicase M.W (Da)150571
Note AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4128 putative ATP-dependent helicase23610.0e+00
sgrSGR_3884 putative ATP-dependent helicase22460.0e+00
samSAM23877_3588 ATP-dependent helicase26120.0e+00
scabSCAB47921 putative ATP-dependent helicase24870.0e+00
saceSACE_6203 ATP-dependent helicase16070.0e+00
nfarnfa37970 putative ATP-dependent helicase12950.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF34181Domain of unknown function (DUF3418)728-1323756.61.7e-227

HA21Helicase associated domain (HA2)468-55969.91.8e-19

OB_NTP_bind1Oligonucleotide/oligosaccharide-binding (OB)-fold624-71455.25.9e-15

Helicase_C1Helicase conserved C-terminal domain288-40545.29.1e-12

AAA_191AAA domain88-21127.82.4e-06

DEAD1DEAD/DEAH box helicase86-23426.73.6e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029425.1 MULTISPECIES: ATP-dependent RNA helicase HrpA [Streptomyces]... 68670.0e+00
WP_189284851.1 ATP-dependent RNA helicase HrpA [Streptomyces anthocyanicus]... 68650.0e+00
WP_016326762.1 MULTISPECIES: ATP-dependent RNA helicase HrpA [Streptomyces]... 68570.0e+00
WP_030872464.1 MULTISPECIES: ATP-dependent RNA helicase HrpA [Streptomyces]... 68530.0e+00
WP_106518129.1 ATP-dependent RNA helicase HrpA [Streptomyces sp. 111WW2] >g... 68460.0e+00
WP_109029024.1 ATP-dependent RNA helicase HrpA [Streptomyces rubrogriseus] ... 68220.0e+00
MYS70068.1 ATP-dependent RNA helicase HrpA [Streptomyces sp. SID5926] 68200.0e+00
WP_087808521.1 ATP-dependent RNA helicase HrpA [Streptomyces sp. CS113] >gb... 67910.0e+00
WP_210917529.1 MULTISPECIES: ATP-dependent RNA helicase HrpA [unclassified ... 67890.0e+00
WP_164459413.1 ATP-dependent RNA helicase HrpA [Streptomyces tendae] >gb 67880.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear